Web(Anecdotally, we have found that phenix.refine often refines to much tighter RMSDs with similar R-frees to other programs. This may reflect different approaches used in the … Webremark 3 remark 3 refinement. ... remark 3 program : phenix 1.17.1_3660 remark 3 authors : paul adams,pavel afonine,vincent chen,ian remark 3 : davis,kreshna gopal,ralf grosse …
B-factor ResearchGate
Webremark 3 remark 3 refinement. ... remark 3 program : phenix 1.9_1690 remark 3 authors : paul adams,pavel afonine,vincent chen,ian remark 3 : davis,kreshna gopal,ralf grosse … Web8. mar 2024 · We used uniquify from CCP4 to select 5% of the reflections for the calculation of free R factors and B-sharpened the observed amplitudes with phenix.remove_aniso (b_iso = 80.0). To obtain the best possible, unbiased electron density for the Dam1 segment, we modelled and refined Ndc80 : Nuf2 to convergence before modelling the Dam1 segment. riftbreaker activate rift station
REFMAC (CCP4: Supported Program) — CCP4Docs documentation
Web11. apr 2024 · Due to large-scale geological deposition processes, slope structures are often stratified, which means that the spatial distribution of the parameters involved in slope reliability evaluation is statistically anisotropic. This paper studies the effect of the statistical anisotropy of undrained shear strength on the probability of slope failure (pf) … Web1. apr 2012 · phenix.refineis a program within the PHENIXpackage that supports crystallographic structure refinement against experimental data with a wide range of … Web9. okt 2024 · The B-factor is given [3] by Bi = 8π2Ui2 where U 2 is the mean square displacement of atom i. As U increases, the B-factor increases and the contribution of the atom to the scattering is decreased. If atoms are incorrectly positioned in the model, their B-factors will tend to be higher than correctly positioned atoms nearby [3]. riftbreaker ammo factory